Amicus Curiae Brief — Joseph Miller, et al., Petitioners v. James V. McDonald, Commissioner, New York State Department of Health, et al.
Supreme Court briefSep 3, 2025
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No. 25-133
In the
Supreme Court of the United States
JOSEPH MILLER, et al.,
Petitioners,
v.
JAMES V. MCDONALD, COMMISSIONER, NEW YORK
STATE DEPARTMENT OF HEALTH, et al.,
Respondents.
On Petition for a Writ of Certiorari to the
United States Court of A ppeals for the Second Circuit
BRIEF OF AMICUS CURIAE THOMAS MORE
SOCIETY IN SUPPORT OF PETITIONERS
Thomas L. Brejcha
Counsel of Record
Michael G. McHale
Nathan Loyd
Thomas More Society
309 West Washington Street,
Suite 1250
Chicago, IL 60606
(312) 782-1680
tbrejcha@thomasmoresociety.org
Counsel for Amicus Curiae
384976
A
(800) 274-3321 • (800) 359-6859
i
TABLE OF CONTENTS
Page
TABLE OF CONTENTS . . . . . . . . . . . . . . . . . . . . . . . . . . i
TABLE OF CITED AUTHORITIES . . . . . . . . . . . . . . iii
INTEREST OF AMICUS CURIAE. . . . . . . . . . . . . . . . 1
INTRODUCTION AND SUMMARY OF
ARGUMENT . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 2
ARGUMENT . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 3
I.
Circuits are diametrically split over the
comparability of medical and religious
exemptions in the context of vaccine
mandates . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 3
A. There is a widespread circuit split
over the comparability of medical
and religious exemptions to vaccine
mandates . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 4
B. Allowing medical but not religious
exemptions impermissibly
de va lue s r el i g iou s r e a s on s for
seeking exemption . . . . . . . . . . . . . . . . . . . . . 8
C. T h i s quest ion i s u rgent a nd of
national importance . . . . . . . . . . . . . . . . . . . 11
ii
Table of Contents
Page
II. T h i s C o u r t s h o u l d c l a r i f y t h e
comparability test under Smith to the
extent possible, or otherwise reverse
Smith to restore substantive equality
for religious observers . . . . . . . . . . . . . . . . . . . . . 13
A. Level of generality of government’s
interests . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 13
B. One-to-one or aggregate comparison . . . . 16
C. Smith fails to ensure substantive
equality for religious observers and
should be overruled . . . . . . . . . . . . . . . . . . . 18
III. Plaintiffs are suffering a burden of the
“same character” as in Yoder . . . . . . . . . . . . . . . 20
CONCLUSION . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 23
iii
TABLE OF CITED AUTHORITIES
Page
CASES:
Calvary Chapel Dayton Valley v. Sisolak,
140 S. Ct. 2603 (2020) . . . . . . . . . . . . . . . . . . . . . . . . . 10
Church of Lukumi Babalu Aye, Inc. v.
City of Hialeah,
508 U.S. 520 (1993) . . . . . . . . . . . . . . . . . . 6, 9-11, 15, 19
Doe v. San Diego Unified Sch. Dist.,
19 F.4th 1173 (9th Cir. 2021) . . . . . . . . . . . . . . . . . . . . . 6
Does 1-11 v. Bd. of Regents of the Univ. of Colorado,
100 F.4th 1251 (10th Cir. 2024) . . . . . . . . . . . . . . . . 4, 9
Does 1-3 v. Mills,
142 S. Ct. 17 (2021) . . . . . . . . . . . . . . . . . . . . . . 3, 14, 15
Doster v. Kendall,
54 F.4th 398 (6th Cir. 2022) ,
vacated on other grounds by
Kendall v. Doster, 144 S. Ct. 481 (2023) . . . . . . . . . 6, 7
Dr. A v. Hochul,
142 S. Ct. 552 (2021) . . . . . . . . . . . . . . . . . . . . 11, 16, 17
E.E.O.C. v. Abercrombie & Fitch Stores, Inc.,
575 U.S. 768 (2015) . . . . . . . . . . . . . . . . . . . . . . . . . . . 19
Emp’t Div. v. Smith,
494 U.S. 872 (1990) . . . . . . . . . . . 1, 3, 13, 14, 17, 19, 20
iv
Cited Authorities
Page
Espinoza v. Montana Department of Revenue,
591 U.S. 464 (2020) . . . . . . . . . . . . . . . . . . . . . . . . 10, 11
Fraternal Order of Police Newark Lodge No. 12
v. City of Newark,
170 F.3d 359 (3d Cir. 1999) . . . . . . . . . . . . . . . . . 6, 9, 15
Fulton v. City of Phila.,
593 U.S. 522 (2021) . . . . . . . . . . . . . . . . . . . . . . 7, 13, 19
Horvath v. City of Leander,
946 F.3d 787 (5th Cir. 2020) . . . . . . . . . . . . . . . . . . . . 19
Jacobson v. Massachusetts,
197 U.S. 11 (1906) . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 7
Leebaert v. Harrington,
332 F.3d 134 (2d Cir. 2003) . . . . . . . . . . . . . . . . . . . . . 21
Lowe v. Mills,
68 F.4th 706 (1st Cir. 2023) . . . . . . . . . . . . . . . . . . . 5, 16
M.A. on behalf of H.R. v. Rockland County
Department of Health,
53 F.4th 29 (2d Cir. 2022) . . . . . . . . . . . . . . . . 7-9, 14, 17
Mahmoud v. McKnight,
102 F.4th 191 (4th Cir. 2024),
rev’d and remanded sub nom.
Mahmoud v. Taylor, 145 S. Ct. 2332 (2025) . . . . . . 21
v
Cited Authorities
Page
Mahmoud v. Taylor,
606 U.S.
, 145 S. Ct. 2332 (2025) . . . . . . 1, 3, 20-23
Masterpiece Cakeshop v.
Colorado Civil Rights Comm’n,
584 U.S. 617 (2018) . . . . . . . . . . . . . . . . . . . . . . . . . . . 15
Miller v. McDonald,
130 F.4th 258 (2d Cir. 2025) . . . 2, 5-7, 9, 13, 14, 16, 21, 23
Nikolao v. Lyon,
875 F.3d 310 (6th Cir. 2017) . . . . . . . . . . . . . . . . . . . . . 7
Nottelson v. Smith Steel Workers
D.A.L.U. 19806, AFL-CIO,
643 F.2d 445 (7th Cir. 1981) . . . . . . . . . . . . . . . . . . . . 18
Roman Catholic Diocese of Brooklyn v. Cuomo,
592 U.S. 14 (2020) . . . . . . . . . . . . . . . . . . . . . . . . . . . . 17
Doe v. San Diego Unified School District,
22 F.4th 1099 (9th Cir. 2022) . . . . . . . . . . . . . . . . . . 8, 9
Sorrell v. IMS Health Inc.,
564 U.S. 552 (2011) . . . . . . . . . . . . . . . . . . . . . . . . . . . 10
Spivack v. City of Philadelphia,
109 F.4th 158 (3d Cir. 2024) . . . . . . . . . . . . . 6, 9, 14, 16
Tandon v. Newsom,
593 U.S. 61 (2021) . . . . . . . . . . . . . . . . . . . . . . . 6, 14, 17
vi
Cited Authorities
Page
Trump v. CASA, Inc.,
606 U.S.
, 145 S. Ct. 2540 (2025) . . . . . . . 13, 16, 17
U.S. Navy SEALs 1-26 v. Biden,
27 F.4th 336 (5th Cir. 2022) . . . . . . . . . . . . . . . . . . . . . 6
We The Patriots USA, Inc. v. Conn. Office of
Early Childhood Dev.,
76 F.4th 130 (2d Cir. 2023) . . . . . . . . . . 6, 7, 9, 10, 14-16
We The Patriots USA, Inc. v. Hochul,
17 F.4th 266 (2d Cir. 2021) . . . . . . . . . . . . . . 5, 6, 16, 17
Wisconsin v. Yoder,
406 U.S. 207 (1972) . . . . . . . . . . . . . . . . . . . . . . 3, 20-23
Yellowbear v. Lampert,
741 F.3d 48 (10th Cir. 2014) . . . . . . . . . . . . . . . . . . . . 15
STATUTES AND OTHER AUTHORITIES:
U.S. Const., amend. I . . . . . . . . . . . . . . . . . . . . . . . . . . . . 18
42 U.S.C. §2000e(j) . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 18
Sup. Ct. R. 37.2 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 1
118 Cong. Rec. 705 (1972) (statement of Sen.
Randolph) . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 18
vii
Cited Authorities
Page
Duncan, Free Exercise is Dead, Long Live Free
Exercise: Smith, Lukumi, and the General
Applicability Requirement, 3 U. Pa. J. Cons.
L. 850 (2001) . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 19
Erika Edwards, “Vaccinations rise when states
button up religious loopholes,” NBC News
(July 5, 2025), https://w w w.nbcnews.com/
health/health-news/vaccinations-rise-statesreligious-loopholes-exemptions-rcna212334 . . . . . . 12
Hackell, Jesse M., “AAP: Nonmedical exemptions to school immunization requirements
should be eliminated,” AAP (July 28, 2025),
ht t p s: // p u bl i c a t i on s . a a p . o r g /a a p n e w s /
news/32619/A AP-Nonmedical-exemptionsto-school-immunization . . . . . . . . . . . . . . . . . . . . . . . 12
Hackell, Jesse M., et al., “Medical vs Nonmedical
Immunization Exemptions for Child Care and
School Attendance: Policy Statement,” Vol. 156,
Issue 2, American Academy of Pediatrics (August
2025), https://tinyurl.com/ynzuhpn4 . . . . . . . . 2, 11, 12
Laycock, Generally Applicable Law and the Free
Exercise of Religion, 95 Neb. L Rev. 1 (2016) . . 15, 16
1
INTEREST OF AMICUS CURIAE.1
Amicus Curiae, the Thomas More Society (“TMS”),
is a not-for-profit, national public interest law firm based
in Chicago, Illinois, dedicated to restoring respect in law
for human life, family, and religious liberty. TMS has
been actively involved in defending religious liberty in
the context of vaccine mandates in recent years, including
serving as plaintiffs’ counsel in several of the cases
discussed below. TMS thus has a distinct interest in this
Court resolving a clear circuit split over whether allowing
medical but not religious vaccine exemptions triggers
strict scrutiny under the Free Exercise Clause. It also
has an interest in this Court bringing clarity to the oftconfused general applicability test even beyond the context
of vaccine mandates. Alternatively, it has a longstanding
interest in this Court overruling Employment Division
v. Smith, and in recognizing parents’ fundamental Free
Exercise rights to direct the religious upbringing of their
children, as recently re-affirmed in Mahmoud v. Taylor.
1. No party’s counsel authored this brief in whole or part;
no party or party’s counsel contributed money intended to
fund the brief; and no person other than Amicus Curiae, their
members, or their counsel contributed money intended to fund
the brief. Counsel were notified of this filing pursuant to Supreme
Court Rule 37.2 on August 20, 2025, more than 10 days before
Respondents’ original September 3, 2025 deadline for filing their
brief in opposition.
2
INTRODUCTION AND SUMMARY
OF ARGUMENT
The Second Circuit’s decision below exacerbates a
diametrical circuit split over whether vaccine mandates
that allow medical but not religious exemptions trigger
strict scrutiny under the Free Exercise Clause. The
Second Circuit held that medical exemptions to New York’s
vaccine requirement for school children further New
York’s broad asserted interest in “protect[ing] the health
of all New Yorkers,” but “[e]xempting religious objectors
. . . detracts from that interest.” Miller v. McDonald, 130
F.4th 258, 267 (2d Cir. 2025) (first alteration in original).
Circuits are now split 4 to 3 on whether medical
exemptions are comparable to religious exemptions in the
context of Free Exercise challenges to vaccine mandates.
See infra. This split is fully ripe and in need of this Court’s
intervention—especially given the American Academy
of Pediatrics’ (“AAP’s”) renewed recommendation for
eliminating non-medical exemptions from school vaccine
mandates. 2
Additionally, the decision below violates this Court’s
longstanding recognition that government may not
devalue religious interests when pursuing secular goals.
And it exposes widespread confusion about how to conduct
general applicability analysis that at minimum requires
this Court’s clarification.
2. Hackell, Jesse M., et al., “Medical vs Nonmedical
Immunization Exemptions for Child Care and School Attendance:
Policy Statement,” Vol. 156, Issue 2, American Academy of
Pediatrics (August 2025), https://tinyurl.com/ynzuhpn4.
3
Even if New York’s actions were neutral and generally
applicable, this case confirms the need to overrule
Employment Division v. Smith, which effectively
eliminated the Free Exercise Clause’s textual protection
from the special burdens religious observers sometimes
bear under rules that are generally applicable only in the
most formal sense. Alternatively, this Court should at least
reverse under Mahmoud v. Taylor, 606 U.S. ----, 145 S.
Ct. 2332 (2025), as New York’s burden on the Old Order
Amish Plaintiffs here is of precisely “the same character”
as the burden imposed on the Old Order Amish parents
and children in Yoder.
ARGUMENT
I.
Ci rcuit s a r e d ia met r ic a lly split over the
comparability of medical and religious exemptions
in the context of vaccine mandates.
Since this Court denied emergency relief in Does 1-3 v.
Mills four years ago, see 142 S. Ct. 17, 18 (2021) (Barrett,
J., concurring) (noting petition challenging denial of
religious but not medical vaccine exemptions was “the
first to address the questions presented”), a diametrical
circuit split has emerged over whether medical exemptions
are comparable to religious exemptions in the context of
vaccine mandates, and thus whether such policies are
subject to strict scrutiny under the Free Exercise Clause.
This split is fully ripe; the decision below improperly
devalues religious interests; and this case is of national
importance.
4
A.
There is a widespread circuit split over the
comparability of medical and religious
exemptions to vaccine mandates.
While the question of medical and religious vaccine
exemption comparability may have been nascent in 2021,
it is not so today. Currently, the First, Fifth, Sixth, and
Tenth Circuits have recognized the comparability of
medical and religious exemptions from vaccine mandates,
while the Second, Third, and Ninth Circuits have held
to the contrary (but with internal conflicts in at least the
Second and Ninth Circuits).
As to circuits recognizing comparability, the Tenth
Circuit recently observed that “a government [vaccine]
policy that grants an exemption for medical reasons
but denies the same exemption for religious reasons
is not generally applicable.” Does 1-11 v. Bd. of Regents
of the Univ. of Colorado, 100 F.4th 1251, 1277 (10th
Cir. 2024) (emphasis added) (internal quotation marks
omitted). The Court held the University’s COVID-19
vaccine exemption policy was “not generally applicable,
and [thus] subject to strict scrutiny,” because it allowed
“secular medical exemptions” on “more favorable terms
than religious exemptions.” Id. at 1277-78. Further, the
University’s policy failed strict scrutiny in part because
it did not explain why the Plaintiffs “pose[d] more of a
risk” of spreading COVID-19 than their “unvaccinated
. . . coworkers[] or other classmates.” Id. at 1278. The
Tenth Circuit thus squarely held that if government allows
medical exemptions from a vaccine mandate, it must allow
religious exemptions on equal terms or otherwise undergo
strict scrutiny. This is in direct conflict with the Second
Circuit’s decision below.
5
The First Circuit has reached a similar conclusion,
deeming it plausible that “the inclusion of [ ] medical
exemption[s]” in Maine’s COVID-19 vaccine mandate for
healthcare workers “undermines the State’s interests
in the same way that a religious exemption would by
introducing unvaccinated individuals into healthcare
facilities.” Lowe v. Mills, 68 F.4th 706, 715 (1st Cir. 2023).
While the Court opined that comparability also hinges on
a comparison of the total number of medical and religious
exemptions, see id. at 715-16, its holding still departs from
the Second Circuit’s decision in Miller that “maintaining
[a] medical exemption” is per se non-comparable. 3
The Fifth and Sixth Circuits have also recognized
the comparability of medical and religious exemptions in
the context of challenges to the Department of Defense’s
(“DOD’s”) COVID-19 vaccine mandate under the Religious
Freedom Restoration Act (“RFRA”). Both circuits held
that DOD’s allowance of medical exemptions, but not
3. To be sure, the Second Circuit further opined that medical
exemptions’ allegedly shorter duration and more limited number
“are meaningfully different” than religious exemptions. Miller,
130 F.4th at 268 (emphasis added). But this argument merely
supplemented its prior conclusion that medical exemptions are
per se non-comparable. See id. Regardless, the Second Circuit’s
refusal to allow discovery on aggregate risk data despite the
extremely small number of Amish students attending the three
isolated Plaintiff schools, see, e.g., Petition at 15, still directly
conf licts with the First Circuit’s remand for discovery on
aggregate risk comparability, cf. Lowe, 68 F.4th at 71. The Second
Circuit’s decision also directly conflicts with prior Second Circuit
precedent itself. See We The Patriots USA, Inc. v. Hochul, 17 F.4th
266, 286 (2d Cir. 2021) (holding at preliminary injunction stage
that “factual development” may show that medical and religious
exemptions are comparable in the aggregate).
6
religious exemptions, rendered its COVID-19 vaccine
mandate “underinclusive” for purposes of RFRA’s
compelling interest test. See U.S. Navy SEALs 1-26
v. Biden, 27 F.4th 336, 352 (5th Cir. 2022); Doster v.
Kendall, 54 F.4th 398, 423 (6th Cir. 2022), vacated on
other grounds by Kendall v. Doster, 144 S. Ct. 481 (2023).
Underinclusiveness is also the touchstone of Free Exercise
comparability analysis. See Church of Lukumi Babalu
Aye, Inc. v. City of Hialeah, 508 U.S. 520, 544-45 (1993);
Tandon v. Newsom, 593 U.S. 61, 62 (2021); Fraternal
Order of Police Newark Lodge No. 12 v. City of Newark,
170 F.3d 359, 366 (3d Cir. 1999) (Alito, J.). Accordingly, the
Fifth and Sixth Circuit’s holdings also directly conflict
with the Second Circuit’s decision below
But, as noted, at least three Circuits have reached the
opposite conclusion. In addition to the Second Circuit’s
decision in Miller—following its similar decisions in We
The Patriots USA, Inc. v. Hochul, 17 F.4th 266 (2d Cir.
2021) (“Hochul”) and We The Patriots USA, Inc. v. Conn.
Office of Early Childhood Dev., 76 F.4th 130 (2d Cir. 2023)
(“We The Patriots”)—both the Third and Ninth Circuits
have also held that medical and religious exemptions
are not comparable in the context of Free Exercise
challenges to vaccine mandates. See Spivack v. City of
Philadelphia, 109 F.4th 158, 172-73 (3d Cir. 2024) (“Unlike
a religious exemption, a medical exemption furthers the
[government’s] interest in keeping its employees safe and
healthy by allowing employees for whom the COVID-19
vaccine would cause death or illness to abstain from
vaccination.”); Doe v. San Diego Unified Sch. Dist., 19
F.4th 1173, 1177-78 (9th Cir. 2021) (medical exemption to
COVID-19 vaccine mandate “serves [the school’s] primary
interest . . . [in] protecting student ‘health and safety’—
7
and so does not undermine the District’s interests as a
religious exemption would”).4
Still, internal conflict exists in both the Second and
Ninth Circuits. In M.A. on behalf of H.R. v. Rockland
County Department of Health, the Second Circuit held
that a county’s allowance of medical exemptions from its
measles vaccine mandate might trigger strict scrutiny
under the Free Exercise Clause, depending on “what
governmental interest the [mandate] was intended to
serve.” 53 F.4th 29, 39 (2d Cir. 2022) (reversing summary
judgment and remanding for “fact-intensive” inquiry into
the interests underlying the mandate). Judge Park opined
separately that the mandate was per se “not generally
applicable because, by allowing a medical exemption, it
‘prohibit[ed] religious conduct while permitting secular
conduct that undermine[d] the government’s interests
in a similar way.’” Id. at 41 (Park, J., concurring)
(quoting Fulton v. City of Phila., 593 U.S. 522, 534 (2021)
(alterations in original)). His conclusion did not hinge
on aggregate risk data or the level of generality of the
government’s interest—contrary to Miller.
Additionally, Judge Bianco dissented in We The
Patriots and would have held that medical exemptions
plainly “pose[] the same health risk to another student
as an unvaccinated student with a religious objection.”
76 F.4th at 165, 169 (Bianco, J., partially dissenting).
4. The Sixth Circuit has also previously opined in dicta that
“compulsory vaccination laws with only medical exemptions do
not violate any federal constitutional right.” Nikolao v. Lyon, 875
F.3d 310, 316 (6th Cir. 2017) (citing Jacobson v. Massachusetts,
197 U.S. 11, 38 (1906)). But that statement is in tension with the
Sixth Circuit’s more recent holding in Doster. See 54 F.4th at 423.
8
He also noted the majority’s affirmance of the dismissal
of Plaintiffs’ claims conflicted with Rockland County’s
holding on “the need for a fully developed record at trial
on the comparable risks associated with religious and
secular exemptions.” Id.
In the Ninth Circuit, no fewer than 10 active Circuit
judges, along with Judge O’Scannlain, would have held
that allowing medical exemptions from a COVID-19
vaccine mandate triggered strict scrutiny under the Free
Exercise Clause. See Doe v. San Diego Unified School
District, 22 F.4th 1099, 1104-05 (9th Cir. 2022) (Bumatay,
J., dissenting from denial of reh’g en banc, joined by
Callahan, Ikuta, R. Nelson, Collins, Lee, and Van Dyke,
J.J.); id. at 1114 (O’Scannlain, J., statement “agree[ing]
with the views expressed by Judge Bumatay”); id. at
1114-15 (Bress, J., dissenting from denial of reh’g en banc,
joined by Bade, J.); id. at 1115 (Forrest, J., dissenting from
denial of reh’g en banc).
Accordingly, there is now a deep and widespread
circuit split—along with internal strife in several
circuits—over whether medical exemptions from vaccine
mandates are comparable to religious exemptions and thus
trigger strict scrutiny under the Free Exercise Clause.
This Court should grant certiorari to resolve the split.
B. Allowing medical but not religious exemptions
impermissibly devalues religious reasons for
seeking exemption.
The purpose of general applicability analysis is to
discern whether the government “has made a value
judgment that” secular motivations for exemption “are
important enough to overcome its general interest
9
[underlying the particular mandate at issue] but that
religious motivations are not.” Fraternal Order, 170 F.3d
at 366. Allowing medical exemptions, but not religious
exemptions, from vaccine mandates plainly violates this
principle.
The Tenth Circuit recognized as much in Does 1-11:
“The [challenged] Policy on its face makes a value judgment
in favor of secular motivations because it has a lower bar
for denying religious exemptions” as compared to “secular
medical exemption[s].” 100 F.4th at 1277. Indeed, if medical
exemptions are important enough for seeking exemption
but religious exemptions are not (or are subject to less
favored treatment), the government has “of necessity
devalue[d] religious reasons for [avoiding vaccination] by
judging them to be of lesser import than nonreligious
reasons.” Lukumi, 508 U.S. at 537-38 (emphasis added).
Circuits holding that medical and religious vaccine
exemptions are not comparable assume that so long as
government is pursuing sufficiently broad interests in
physical “health,” it can leave religious interests for
avoiding vaccination behind. See, e.g., We The Patriots, 76
F.4th at 151 (medical exemption consistent with vaccine
mandate’s furtherance of “health and safety of Connecticut
students”); Miller, 130 F.4th at 267 (same); San Diego, 19
F.4th at 1178 (same). This assumption is particularly stark
in decisions stating that medical exemption comparability
depends on the particular interest asserted by the
government in promulgating its respective mandate. See
Rockland Cnty., 53 F.4th at 39; Spivack, 109 F.4th at 175.
But this Court has made clear that “[t]he Free
Exercise Clause protect[s] religious observers against
unequal treatment.” Lukumi, 508 U.S. at 542 (internal
10
quotes omitted). Thus, it cannot be true that government
can pursue any interest at the expense of religious
exercise, or that comparability hinges on a government’s
mere “say so.” Justice Kavanaugh explained as much
in Calvary Chapel Dayton Valley v. Sisolak, 140 S. Ct.
2603 (2020), where Nevada sought to re-open casinos and
restaurants on a more favorable basis than churches “to
jump-start business activity and preserve the economic
well-being of its citizens” during COVID-19. Id. at
2614 (Kavanaugh, J., dissenting). Nevada’s approach
“reflect[ed] an implicit judgment that for-profit assemblies
are important and religious gatherings are less so,” thus
“‘devaluing religious reasons’ for congregating ‘by judging
them to be of lesser import than nonreligious reasons,’ in
violation of the Constitution.” Id. (quoting Lukumi, 508
U.S. at 537-38). Applied here, the practice of allowing
medical but not religious exemptions reflects an implicit
judgment that religious well-being is “of lesser import”
than physical well-being—even as it remains objectively
undeniable that a medical exemption allows one to remain
unvaccinated against the precise disease the otherwiserequired vaccine is designed to prevent (or ameliorate).
That is hardly “equal treatment” for religious observers.
Accord We The Patriots, 76 F.4th at 172 (Bianco, J.,
partially dissenting) (stating same).
Justice Thomas opined similarly in Espinoza v.
Montana Department of Revenue, 591 U.S. 464 (2020),
noting that when government argues it may not “endorse”
religion, it “communicates a message that religion is
dangerous and in need of policing, which in turn has the
effect of tilting society in favor of devaluing religion,” id. at
494 (Thomas, J., concurring) (citing Sorrell v. IMS Health
Inc., 564 U.S. 552, 578-79 (2011) (content-based restrictions
“tilt public debate in a preferred direction”)). The same
11
applies here: allowing medical exemptions in service of
physical health while precluding religious exemptions has
the effect of exalting physical over religious well-being
and thereby “communicates a message that religion is
dangerous and in need of policing.” Id. at 494 (Thomas,
J., concurring).
This is all the more true where, as here, the sole object
of the legislation is to eliminate a previously existing
religious exemption while leaving the availability of
medical exemptions in place. See Dr. A v. Hochul, 142 S.
Ct. 552, 556 (2021) (Gorsuch, J., dissenting) (recognizing
that elimination of previously existing religious exemption
from COVID-19 vaccine mandate “leave[s] little doubt
that the revised mandate was specifically directed at the
applicants’ unorthodox religious beliefs and practices”);
see also Lukumi, 508 U.S. at 531 (“Neutrality and general
applicability are interrelated, and . . . failure to satisfy
one requirement is a likely indication that the other has
not been satisfied.”).
Accordingly, New York’s direct elimination of religious
exemptions while maintaining medical exemptions
indicates an impermissible value judgment favoring
physical over religious well-being—contrary to the Free
Exercise Clause’s minimum promise of equal treatment
treatment for religious observers.
C.
This question is urgent and of national
importance.
In August 2025, the AAP renewed its position calling
for the elimination of “nonmedical” exemptions from
school vaccine mandates. See Hackell, et al., supra n.2 at
pp. 73-77. The AAP specifies that “nonmedical exceptions
12
based on religious belief can substantially limit the
public health value of vaccine requirements for school
attendance” and thus allegedly render schools “less safe.”
Id. at p. 75. The AAP also alleges that no “major world
religious traditions” officially “preclude adherents from
being vaccinated”—confirming the anti-“unorthodox”
bias behind its recommendation. Notably, the A AP
originally adopted this position in 2016. See Hackell,
“AAP: Nonmedical exemptions to school immunization
requirements should be eliminated,” AAP (July 28, 2025).5
Since then, Maine, New York, and Connecticut have
eliminated religious exemptions from their school vaccine
requirements, see Petition at 9, following California’s
elimination of the same in 2015, see id.
Such a marked trend, buoyed by the AAP’s express
support, confirms the urgency and national importance of
clarifying whether government vaccine policies allowing
medical but not religious exemptions (or at least those
eliminating previously existing religious exemptions
consistent with the A AP’s advocacy) trigger strict
scrutiny under the Free Exercise Clause. See also, e.g.,
Erika Edwards, “Vaccinations rise when states button up
religious loopholes,” NBC News (July 5, 2025) (discussing
pending Massachusetts bill to remove “nonmedical
exemptions” from mandatory vaccination in public
schools).6 Guidance from this Court on the constitutionality
of such policies is urgently needed.
5. https://publications.aap.org/aapnews/news/32619/AAPNonmedical-exemptions-to-school-immunization.
6 . ht t p s: // w w w. nb c ne w s .c om / he a lt h / he a lt h -ne w s /
vaccinations-r ise-states-relig ious-loopholes- exemptionsrcna212334.
13
II. This Court should clarify the comparability test
under Smith to the extent possible, or otherwise
reverse Smith to restore substantive equality for
religious observers.
The decision below exacerbates great confusion in the
lower courts about how to conduct comparability analysis
under Smith. This Court’s intervention is sorely needed
at least to clarify the extent to which governments can
assert broad interests at sky-high levels of generality and
thus effectively load the dice of comparability analysis
before it gets off the ground. It should also clarify whether
general applicability turns on a comparison of aggregate
numbers of total or actual expected exemptions (even
for non-parties), especially after this Court’s recent
recognition in Trump v. CASA, Inc., 606 U.S. ---- , 145 S.
Ct. 2540 (2025) that federal courts generally cannot issue
universal injunctions.
Moreover, Miller confirms the need to overrule Smith,
which eliminated the Free Exercise Clause’s promise
of substantive equality for religious believers to allow
reprieve from special burdens they can suffer from rules
that are “generally applicable” only in the most formalistic
sense.
A.
Level of generality of government’s interests.
Because this Court has stated that general applicability
turns on “the government’s asserted interests” underlying
the relevant mandate, Fulton, 593 U.S. at 534 (emphasis
added), several lower courts have looked to extra-textual
legislative indicia in deciding whether an available
secular exemption undermines a challenged law’s purpose.
14
See, e.g., Spivack, 109 F.4th at 175 (Tandon “indicates
we must give some deference to how the government
characterizes its own interests”). But that approach easily
allows lawmakers to effect religious gerrymanders by
strategically-placed statements in the record. Accord
We the Patriots, 76 F.4th at 171 (Bianco, J., partially
dissenting). This Court should cut off that trend.
As Judge Park has recognized, Smith’s generalapplicability test “embraces a purposivist approach
that is vulnerable to manipulation and arbitrariness.”
Rockland Cnty., 53 F.4th at 42 (Parker, J., concurring).
Justices Gorsuch, Thomas, and Alito have thus warned
courts not to “restat[e] the State’s interests . . . at an
artificially high level of generality” based on “post-hoc
reimaginings” that are broader than “the government’s
actually asserted interests.” Does 1-3, 142 S. Ct. at 20
(Gorsuch, J., dissenting, joined by Thomas, J., and Alito,
J.) (original emphasis).
But some courts have responded by relying on
“actually asserted” broad interests lurking in the record.
See We The Patriots, 76 F.4th at 151-52 (noting legislative
history asserting purpose to “protect the public health”
and concluding “there is [thus] no cause to fear that
Connecticut or the district court has ‘restat[ed] the State’s
interest . . . at an artificially high level of generality’”)
(alterations in original) (quoting Does 1-3, 142 S. Ct. at 20
(Gorsuch, J., dissenting)); accord Spivack, 109 F.4th at 175
(similar); Miller, 130 F.4th at 267 (looking to “Sponsor’s
Memorandum” and “Bill Jacket”).
Missing from these courts’ analyses, however, is the
Free Exercise Clause’s longstanding protection against
15
“religious gerrymander[s].” Lukumi, 508 U.S. at 535
(internal quotations omitted). For this reason, the generalapplicability test’s vulnerability to manipulation requires
more than bare judicial reliance on a government’s (or
policymaker’s) mere say-so in the record. Otherwise,
governments could enact de facto gerrymanders “by
adjusting the dials” of a challenged law’s asserted purpose
“just right.” Masterpiece Cakeshop v. Colorado Civil
Rights Comm’n, 584 U.S. 617, 652 (2018) (Gorsuch, J.,
concurring) (original emphasis).
Instead, courts should look to whether a secular
exemption undermines at least one of a challenged law’s
objective purposes. If so, strict scrutiny applies. Judge
Bianco recognized as much in his We The Patriots
dissent, noting that while a medical exemption “may
support the State’s interest in one way (namely, avoiding
any harm to that student from the vaccination),” it “may
also undermine the state’s interest in another way that
is similar to the impact of a religious exemption (namely,
avoiding the spread of disease in public schools).” We The
Patriots, 76 F.4th at 168 (Bianco, J., partially dissenting).
This approach is consistent with then-Judge Alito’s
analysis of the no-beard requirement in Fraternal Order.
Surely the medical exemption for officers with “pseudo
folliculitis barbae” promoted a healthy police force. See 170
F.3d at 360. And “almost any state action might be said to
touch on ‘. . . health and safety.’” Does 1-3, 142 S. Ct. at 20
(Gorsuch, J., dissenting) (quoting Yellowbear v. Lampert,
741 F.3d 48, 57 (10th Cir. 2014)). But the medical exemption
“undoubtedly undermine[d]” the no-beard rule’s objective
purpose “in fostering a uniform appearance.” Fraternal
Order, 170 F.3d at 366 (emphasis added); see Laycock,
Generally Applicable Law and the Free Exercise of
16
Religion, 95 Neb. L Rev. 1, 8 (2016) (noting a law’s “object”
includes “simply what the law does, or what it is intended
to do, regardless of why legislators wanted to do those
things”).
Accordingly, this Court should clarify that if a secular
exemption undermines at least one of the law’s objective
purposes (even if statements lurking in the record also
assert much broader interests) to the same or greater
extent as a requested religious exemption, general
applicability is lacking and strict scrutiny applies.
B. One-to-one or aggregate comparison.
In Trump v. CASA, Inc., this Court held that universal
injunctions violate the “long” “equitable tradition” that
“courts generally may administer complete relief between
the parties.” 145 S. Ct. at 2557 (original emphasis). Yet in
Hochul, the Second Circuit denied relief for 17 discrete,
individual plaintiffs spread throughout New York based
on “data” allegedly “indicat[ing] that claims for religious
exemptions” in the “aggregate”—even by non-parties—
”are far more numerous” than requests for medical
exemptions. 17 F.4th at 287. Multiple courts have since
followed that approach. See We the Patriots, 76 F.4th at
152; Lowe, 68 F.4th at 716; Spivack, 109 F.4th at 179 n.16;
Miller, 130 F.4th at 268.
But as Justice Gorsuch has explained, “this Court’s
general applicability test doesn’t turn on that kind of
numbers game.” Dr. A, 142 S. Ct. at 556 (Gorsuch, J.,
dissenting). Justice Gorsuch’s rationale rings all the more
true after CASA: “Laws operate on individuals; rights
belong to individuals. And the relevant question here
involves a one-to-one comparison between the individual
17
seeking a religious exemption and one benefiting from a
secular exemption.” Id. (emphasis added).
In contrast, Hochul insisted this Court’s decisions
in “Roman Catholic Diocese [of Brooklyn v. Cuomo, 592
U.S. 14 (2020)] and Tandon did not involve a one-to-one
comparison of the transmission risk posed by an individual
worshiper and[ ] an individual shopper,” but instead of
“the risks posed by groups of various sizes in various
settings.” 17 F.4th at 287. But the plaintiffs in those cases
were seeking to gather in groups—and thus comparison
to other group settings was required. In neither case did
this Court look to the aggregate risks posed by even nonplaintiff religious gatherings in comparison to permitted
secular gatherings. See Tandon, 593 U.S. at 62 (focusing
on “the religious exercise at issue”); Roman Catholic
Dioc., 592 U.S. at 17-18 (highlighting particular plaintiffs’
“admirable safety records”).
As Justice Gorsuch has explained, courts might
consider aggregate exemption numbers at the strict
scrutiny stage if a state asserts a compelling interest
in limiting the overall number of exemptions (say,
to achieve herd immunity). Dr. A, 142 S. Ct. at 556
(Gorsuch, J., dissenting). Even then, however, the state’s
aggregate exemption limit would need to be “divided in a
nondiscriminatory manner between medical and religious
objectors.” Id. at 556-57. “But none of this bears on the
preliminary question whether such a mandate is generally
applicable or whether it treats a religious person less
favorably than a secular counterpart.” Id. at 557.
This Court should grant certiorari and clarify this
issue.
18
C.
Smith fails to ensure substantive equality for
religious observers and should be overruled.
Alternatively, this Court should simply reverse Smith.
In addition to the workability problems of its general
applicability test discussed above, Smith “relegate[d]
a serious First Amendment value to the barest level of
minimum scrutiny that the Equal Protection Clause
already prohibits.” Emp’t Div. v. Smith, 494 U.S. 872, 894
(1990) (O’Connor, J., concurring); see also Rockland Cnty.,
53 F.4th at 42 (Park, J., concurring) (criticizing Smith’s
“inflexible,” “all-or-nothing” general applicability test).
But this Court has long “recognized that the Free Exercise
protects values distinct from those protected by the Equal
Protection Clause,” including because “the language of
the Clause itself makes clear” that “an individual’s free
exercise of religion is a preferred constitutional activity.”
Smith, 494 U.S. at 901-02 (O’Connor, J., concurring)
(emphasis added).
In other words, Smith wrongly transformed the Free
Exercise Clause into a rule of formal equality, ensuring
only that secular and religious actors are subject to the
same burdens from the government’s perspective. But
as a rule of religious liberty, the Free Exercise Clause
is inherently ordered toward “reliev[ing] [religious]
individuals of a special burden that others do not suffer.”
Nottelson v. Smith Steel Workers D.A.L.U. 19806,
AFL-CIO, 643 F.2d 445, 454 (7th Cir. 1981) (emphasis
added) (interpreting Title VII’s analogous religious
accommodation requirement); see also 118 Cong. Rec. 705
(1972) (statement of Sen. Randolph explaining that Section
701(j), codified at §2000e(j), reflects “the same concepts
as are included in the first amendment”).
19
As Justices A lito, Thomas, and Gorsuch have
noted, “the absence of any language referring to equal
treatment” in the Free Exercise Clause “is striking.”
Fulton, 593 U.S. at 569 (Alito, J., concurring, joined
by Thomas, J., Gorsuch, J.). Indeed, “[t]he Founders
understood that the right to free exercise would require
more than simple neutrality toward religion,” but rather
“that the government accommodate the religious practice,
rather than the reverse.” Horvath v. City of Leander, 946
F.3d 787, 796 (5th Cir. 2020) (Ho, J., partially concurring).
Congress adopted this precise concept into Title VII, see
E.E.O.C. v. Abercrombie & Fitch Stores, Inc., 575 U.S. 768,
775 (2015) (“Title VII requires otherwise-neutral policies
to give way for the need for an accommodation”), further
evincing that the Free Exercise Clause protects more than
merely formal equality.7 See also Duncan, Free Exercise
is Dead, Long Live Free Exercise: Smith, Lukumi, and
the General Applicability Requirement, 3 U. Pa. J. Cons.
L. 850, 880 (2001) (“Smith and Lukumi have transformed
the Free Exercise Clause from a liberty rule . . . to an
equality rule.”).
In reality, restoring the Free Exercise Clause’s liberty
rule would paradoxically restore substantive equality for
religious believers. During the Prohibition, for example,
the government exempted “the sacramental use of wine
by the Roman Catholic Church.” Smith, 494 U.S. at 913
n.6 (Blackman, J., dissenting). Absent an exemption, the
general ban on wine would have undoubtedly burdened
Catholics’ religious beliefs more than those of non7. That Justice Scalia (who authored Abercrombie) so clearly
perceived the insufficiency of neutral rules in the Title VII context
confirms the error of his contrary conclusion in the Free Exercise
context in Smith.
20
Catholics. The same was true in Wisconsin v. Yoder, 406
U.S. 207 (1972), where the state’s compulsory education
law plainly burdened members of the Amish religion more
than others. Yoder’s enforcement of the Free Exercise
Clause’s liberty rule restored the Amish to equal footing
with other members of society whose philosophical or
religious beliefs were not burdened by the challenged law.
The same is true here. Treating the Free Exercise
Clause as a liberty rule would remove the special burdens
imposed by New York’s vaccination requirement on the
Amish plaintiffs’ unique religious beliefs—or at least
require New York to show it has a sufficiently tailored
compelling interest to override those beliefs—regardless
of whether the law is “neutral and generally applicable”
in a formal sense. The free exercise of religion requires
nothing less. This Court should overturn Smith.
III. Plaintiffs are suffering a burden of the “same
character” as in Yoder.
If this Court does not find a lack of general applicability
or overturn Smith, it should reverse under Mahmoud. In
the case below, plaintiffs asserted that Wisconsin v. Yoder,
406 U.S. 205 (1972) controlled because Yoder, like this
case, involved the education decisions of Amish parents,
the Amish community’s unique status in American
society, and a state policy forcing Amish families to forego
religious practices. Mahmoud confirms that Plaintiffs
were correct.
Rather than follow Supreme Court precedent, the
Second Circuit constrained Yoder to its unique facts.
21
Citing its own precedent, the Second Circuit concluded
that the Supreme Court “took pains explicitly to limit
[Yoder’s] holding.” Miller, 130 F.4th at 270 (citing Leebaert
v. Harrington, 332 F.3d 134, 144 (2d Cir. 2003)). As the
Second Circuit saw it, Yoder was sui generis, and only
meant that a state cannot force Amish children to attend
high school. Yoder, therefore, would only apply when the
Amish face an “existential threat” to their faith or way of
life. Id. at 271. And to reassure itself, the Second Circuit
relied on the Fourth Circuit’s now overruled holding in
Mahmoud v. McKnight, 102 F.4th 191, 211 (4th Cir. 2024),
rev’d and remanded sub nom. Mahmoud v. Taylor, 145
S. Ct. 2332 (2025). Miller, 130 F.4th at 270 n. 16.
This Court’s decision in Mahmoud shows that the
Fourth Circuit’s application of Yoder was deeply flawed.
Rather than being limited to its circumstances, “Yoder
is an important precedent of this Court, and it cannot be
breezily dismissed as a special exception granted to one
particular religious minority.” Mahmoud, 145 S. Ct. at
2357.
“When the burden imposed is of the same character
as that imposed in Yoder, we need not ask whether the
law at issue is neutral or generally applicable before
proceeding to strict scrutiny.” Id. at 2361. A policy
need only “substantially interfere with the religious
development of the parent’s children” or “pose a very real
threat of undermining the religious beliefs and practices
that parents wish to instill in their children.” Id. (cleaned
up). This Court’s Mahmoud decision shows that the “same
character” standard applies to a broad range of coercive
measures taken by school officials.
22
In Yoder, the Court analyzed a compulsory attendance
law requiring all Wisconsin children to attend school until
the age of 16. Yoder, 406 U.S. at 207. The parent plaintiffs
objected to sending their 14- and 15-year-old children to
any school at all, because doing so removed their children
from their community during a formative adolescent
period. Id. at 211. This Court noted that Wisconsin’s law
would “ultimately result in the destruction of the Old
Order Amish church community.” Id. at 212. Given that the
Wisconsin community included only about 250 children,
this threat was real. Id. at 245 (Douglas, J., dissenting
in part). As Justice Sotomayor recently explained, “[t]he
problem in Yoder was . . . that it compelled Amish parents
to do what their religion forbade.” Mahmoud 145 S. Ct.
at 2389 (Sotomayor, J., dissenting).
In Mahmoud, however, there was no such existential
threat to plaintiffs’ religions. The plaintiffs, who were
Muslim, Catholic, and Orthodox (id. at 2347-2348), never
asserted that Montgomery County would extinguish
their billion- and million-member religions. Nor did the
Mahmoud parents assert that their religions explicitly
“forbade” their children to read pro-LGBT books.
Nonetheless, the Court concluded that “the burden [was]
of the exact same character as the burden in Yoder.” Id.
(emphasis added).
This case, too, presents a burden of the “exact same
character as the burden in Yoder” because New York’s
policy interferes with and poses a very real threat of
undermining the religious upbringing of plaintiffs’
children. Indeed, it is an even closer parallel to Yoder than
Mahmoud was, because Plaintiffs’ religious beliefs “do
not permit them to inject their children with vaccines.”
23
Miller, 130 F.4th at 262 (cleaned up). New York is forcing
parents to “do what their religion forb[ids].” Mahmoud,
145 S. Ct. at 2389 (Sotomayor, J., dissenting) (citing Yoder).
If Mahmoud was the “exact same character” as Yoder,
this case is Yoder’s identical twin.
The foundation of the Second Circuit’s decision—that
Yoder is a sui generis case limited to its facts—is simply
false. This Court has confirmed that Yoder reaches much
further than the Second Circuit’s limitations. At minimum,
therefore, this Court should correct the Second Circuit’s
misinterpretation of Yoder.
CONCLUSION
This Court should grant the petition for a writ of
certiorari.
Respectfully submitted,
Thomas L. Brejcha
Counsel of Record
Michael G. McHale
Nathan Loyd
Thomas More Society
309 West Washington Street,
Suite 1250
Chicago, IL 60606
(312) 782-1680
tbrejcha@thomasmoresociety.org
Counsel for Amicus Curiae
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